fix: updates to APT packages list and the Dockerfile

.github/workflows/build.yaml

@@ -0,0 +1,18 @@
+name: Docker Image CI
+
+on:
+  push:
+    branches: [ "master" ]
+  pull_request:
+    branches: [ "master" ]
+
+jobs:
+
+  build:
+
+    runs-on: ubuntu-20.04
+
+    steps:
+    - uses: actions/checkout@v4
+    - name: Build the Docker image
+      run: docker build . --file Dockerfile --tag hdf-h4cf-test:$(date +%s)

Dockerfile

@@ -1,64 +1,66 @@
-FROM ubuntu:latest
+FROM ubuntu:18.04
 
 MAINTAINER The HDF-EOS Tools and Information Center <eoshelp@hdfgroup.org>
 
 ENV HOME /root
 
 COPY ["./apt.txt", "./"]
 
+ARG DEBIAN_FRONTEND=noninteractive
+ENV TZ=Etc/UTC
 RUN apt update && apt install -yq $(grep -vE "^\s*#" ./apt.txt)
 
 #Build HDF4 lib.
-ARG HDF4_VER=4.2.13
-RUN wget https://observer.gsfc.nasa.gov/ftp/edhs/hdfeos/latest_release/hdf-${HDF4_VER}.tar.gz; \
-    tar zxvf hdf-${HDF4_VER}.tar.gz; \
-    cd hdf-${HDF4_VER}; \
-    ./configure --prefix=/usr/local/ --disable-netcdf; \
-    make && make check && make install; \
-    cd ..; \
-    rm -rf /hdf-${HDF4_VER} /hdf-${HDF4_VER}.tar.gz 
+ARG HDF4_VER=4.2.16
+RUN wget https://hdf-wordpress-1.s3.amazonaws.com/wp-content/uploads/manual/HDF4/HDF${HDF4_VER}-2/src/hdf-${HDF4_VER}-2.tar.gz && \
+    tar zxvf hdf-${HDF4_VER}-2.tar.gz && \
+    cd hdf-${HDF4_VER}-2 && \
+    ./configure --prefix=/usr/local/ --enable-shared --disable-netcdf --disable-fortran && \
+    make && make check && make install && \
+    cd .. && \
+    rm -f hdf-${HDF4_VER}-2.tar.gz 
 
 #Build HDF-EOS2 lib.
-ARG HDFEOS_VER=2.19v1.00
-RUN wget https://observer.gsfc.nasa.gov/ftp/edhs/hdfeos/previous_releases/HDF-EOS${HDFEOS_VER}.tar.Z; \
-    tar zxvf HDF-EOS${HDFEOS_VER}.tar.Z; \
-    cd hdfeos; \
-    ./configure --prefix=/usr/local/ --enable-install-include --with-hdf4=/usr/local; \
-    make && make check && make install; \
-    cd ..; \
-    rm -rf /hdfeos /HDF-EOS${HDFEOS_VER}.tar.Z 
+ARG HDFEOS2_VER=2.20v1.00
+RUN wget -O hdf-eos${HDFEOS2_VER}.tar.Z https://git.earthdata.nasa.gov/rest/git-lfs/storage/DAS/hdfeos/cb0f900d2732ab01e51284d6c9e90d0e852d61bba9bce3b43af0430ab5414903?response-content-disposition=attachment%3B%20filename%3D%22HDF-EOS${HDFEOS_VER}.tar.Z%22%3B%20filename*%3Dutf-8%27%27HDF-EOS2.20v1.00.tar.Z && \
+    tar zxvf hdf-eos${HDFEOS2_VER}.tar.Z && \
+    cd hdfeos && \
+    ./configure --prefix=/usr/local/ --enable-install-include --with-hdf4=/usr/local && \
+    make && make check && make install && \
+    cd .. && \
+    rm -f hdf-eos${HDFEOS2_VER}.tar.Z
 
 # Build HDF5 lib.
-ARG HDF5_VER=5-1.8.19
-RUN wget https://observer.gsfc.nasa.gov/ftp/edhs/hdfeos5/latest_release/hdf${HDF5_VER}.tar.gz; \
-    tar zxvf hdf${HDF5_VER}.tar.gz; \
-    cd hdf${HDF5_VER}; \
-    ./configure --prefix=/usr/local/; \
-    make && make check && make install; \
-    cd ..; \
-    rm -rf /hdf${HDF5_VER}/hdf${HDF5_VER}.tar.gz
+ARG HDF5_VER=1.14.4-2
+ARG HDF5_DOTVER=1.14.4.2
+RUN wget https://github.com/HDFGroup/hdf5/releases/download/hdf5_${HDF5_DOTVER}/hdf5-${HDF5_VER}.tar.gz && \
+    tar zxvf hdf5-${HDF5_VER}.tar.gz && \
+    cd hdf5-${HDF5_VER} && \
+    ./configure --prefix=/usr/local/ && \
+    make && make check && make install && \
+    cd .. && \
+    rm -f hdf5-${HDF5_VER}.tar.gz
 
 # Build netCDF C lib.
-ARG NETCDF_C_VER=4.4.1.1
-RUN wget ftp://ftp.unidata.ucar.edu/pub/netcdf/netcdf-${NETCDF_C_VER}.tar.gz -P /tmp \
-    && tar -xf /tmp/netcdf-${NETCDF_C_VER}.tar.gz -C /tmp \
-    && cd /tmp/netcdf-${NETCDF_C_VER} \
-    && CPPFLAGS=-I/usr/local/include LDFLAGS=-L/usr/local/lib LD_LIBRARY_PATH=-L/usr/local/lib ./configure --prefix=/usr/local --enable-shared \
-    && cd /tmp/netcdf-${NETCDF_C_VER} \
-    && make \
-    && cd /tmp/netcdf-${NETCDF_C_VER} \
-    && make install \
-    && rm -rf /tmp/netcdf-${NETCDF_C_VER}.tar.gz
+ARG NETCDF_C_VER=4.9.2
+RUN wget https://github.com/Unidata/netcdf-c/archive/refs/tags/v${NETCDF_C_VER}.tar.gz && \
+    tar zxvf v${NETCDF_C_VER}.tar.gz && \
+    cd netcdf-c-${NETCDF_C_VER} && \
+    CPPFLAGS="-Ihdf5-${HDF5_VER}/include -Ihdf-${HDF4_VER}-2/include" \
+    LDFLAGS="-Lhdf5-${HDF5_VER}/lib -Lhdf-${HDF4_VER}-2/lib" && \
+    ./configure --prefix=/usr/local --disable-byterange --enable-shared --enable-hdf4 --enable-hdf4-file-tests && \
+    make && make check && make install && \
+    cd .. && rm -rf netcdf-c-${NETCDF_C_VER} && rm -f v${NETCDF_C_VER}.tar.gz
 
 # Build H4CF Conversion Toolkit
-ARG H4CF_VER=1.2
-RUN wget http://hdfeos.org/software/h4cflib/h4cflib_${H4CF_VER}.tar.gz; \
-    tar zxvf h4cflib_${H4CF_VER}.tar.gz; \
-    cd h4cflib_${H4CF_VER} \
-    && CPPFLAGS=-I/usr/local/include LDFLAGS=-L/usr/local/lib LD_LIBRARY_PATH=-L/usr/local/lib \
-    ./configure --prefix=/usr/local/ --with-hdf4=/usr/local/ --with-hdfeos2=/usr/local/ --with-netcdf=/usr/local/; \
-    make && make install; \
-    cd ..; \
-    rm -rf /h4cflib_${H4CF_VER} /hf4cflib_${H4CF_VER}.tar.gz
+ARG H4CF_VER=1.3
+RUN wget http://hdfeos.org/software/h4cflib/h4cflib_${H4CF_VER}.tar.gz && \
+    tar zxvf h4cflib_${H4CF_VER}.tar.gz && \
+    cd h4cflib_${H4CF_VER} && \
+    CPPFLAGS=-I/usr/local/include LDFLAGS=-L/usr/local/lib LD_LIBRARY_PATH=-L/usr/local/lib && \
+    ./configure --with-hdf4=hdf-${HDF4_VER}-2 --with-hdfeos2=hdfeos --with-netcdf=hdf5-${HDF5_VER} && \
+    make && make install && \
+    cd .. && \
+    rm -f hf4cflib_${H4CF_VER}.tar.gz
 
-ENV LD_LIBRARY_PATH /usr/local/lib
+ENV LD_LIBRARY_PATH /usr/local/lib

README.md

@@ -1,6 +1,6 @@
 # docker-h4cf
 
-## Ubuntu based Docker container for HDF4 CF Conversion Toolkit
+## Ubuntu Docker image for HDF4 CF Conversion Toolkit
 
 The Docker file `Dockerfile` sources an Apt package file named `apt.txt`, which lists the Apt packages required to build the image.
 

apt.txt

@@ -6,6 +6,7 @@ bzip2
 tar
 libghc-zlib-dev
 libjpeg-dev
+libxml2-dev
 gfortran
 bison
 flex