release: 0.9.59 — incremental dedup node-loss fix, pool-start fallback, 47% faster Python resolution, explain path::Symbol, hook rebuild-root clamp

Author: safishamsi

CHANGELOG.md

@@ -2,7 +2,15 @@
 
 Full release notes with details on each version: [GitHub Releases](https://github.com/safishamsi/graphify/releases)
 
-## 0.9.58 (unreleased)
+## 0.9.59 (unreleased)
+
+- Fix: an incremental rebuild no longer drops cross-file `concept` nodes from files it didn't touch — global dedup during a merge now protects existing nodes from untouched files instead of collapsing same-labeled ones across them (#3477, thanks @hopstreax).
+- Fix: extraction now falls back to sequential in-process work when the process pool cannot start (e.g. POSIX semaphore exhaustion), instead of aborting the whole run (#3497, thanks @curtismu7).
+- Performance: Python symbol resolution is roughly 47% faster — path resolution is memoized, each file parses once across both resolution passes, and the tree walk is iterative rather than recursive; extraction output is unchanged (#3500 / #3501 / #3502, thanks @abhay-codes07).
+- Fix: `graphify explain` now accepts a `path::Symbol` form to disambiguate a symbol that shares its name with its file, and the ambiguity hint now shows a form the resolver actually accepts (#3485, thanks @ayushcodes10).
+- Fix: the git hook now keeps its rebuild root inside the repository — a committed `.graphify_root` pointing outside the worktree is ignored and falls back to the repo top, so a checked-in marker can't steer the hook to scan or write outside the tree (#3265, thanks @ayushcodes10).
+
+## 0.9.58 (2026-09-10)
 
 - Fix: a call to a Python function defined nested inside another function now resolves to that inner definition per lexical scope, instead of leaking to a same-named function elsewhere; direct recursion is preserved as a self-loop (#3410, thanks @hopstreax).
 - Fix: submodule imports inside a PEP 420 namespace package (a directory with no `__init__.py`) now resolve to the target module instead of being dropped (#3429, thanks @flaukowski).

pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "graphifyy"
-version = "0.9.58"
+version = "0.9.59"
 description = "AI coding assistant skill (Claude Code, CodeBuddy, Codex, OpenCode, Kilo Code, Cursor, Gemini CLI, Aider, OpenClaw, Factory Droid, Trae, Hermes, Kiro, Pi, Devin CLI, Google Antigravity) - turn any folder of code, docs, papers, images, or videos into a queryable knowledge graph"
 readme = "README.md"
 license = "Apache-2.0"