The Java library to run Deep Learning models
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Updated
Oct 8, 2026 - Java
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bioimage-io
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PyTorch/MONAI training code for the AxonPath segmentation models: myelinated fibres, inner cylinders and axons in electron microscopy and brightfield images. Models are exported in BioImage.IO format for the AxonPath QuPath extension.
deep-learning pytorch image-segmentation axon myelin instance-segmentation bioimage-analysis qupath myelin-segmentation myelinated-axon monai bioimage-io g-ratio
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Oct 1, 2026 - Python
QuPath extension for deep learning segmentation and morphometry of myelinated nerve fibres in EM and brightfield images
deep-learning neuroscience pytorch segmentation image-analysis electron-microscopy axon myelin instance-segmentation neuroscience-methods bioimage-analysis qupath myelin-segmentation myelinated-axon bioimage-io qupath-extension brightfield-microscopy g-ratio
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Updated
Oct 1, 2026 - Java
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