bionano
Here are 10 public repositories matching this topic...
Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data
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Nov 13, 2023 - Python
The repository for codes developed to generated the Maize NC358 assemblies and analyses.
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Apr 23, 2020 - Jupyter Notebook
Bionano SCaffolding Correction Tool
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Nov 9, 2020 - Python
an open-source (GPLv3) standalone Python package to analyze optical mapping data, with de novo repeat motif detection and analysis capabilities
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Jun 6, 2022 - Python
A human-first SV annotation snakemake pipeline based on nanotatoR working with optical mapping (Bionano Genomics) data
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Sep 30, 2021 - R
A combination of optical genome mapping with Bionano and whole genome sequencing short-read data. This pipeline was created to help integrate structural variant calling from these two technologies.
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Jan 17, 2025 - Shell
bionano annovar annotation
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Jul 28, 2020 - Perl
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