drug-safety

BioDEX: Large-Scale Biomedical Adverse Drug Event Extraction for Real-World Pharmacovigilance.

R interface for FDA Adverse Event Reporting System

Cardiac Action Potential Prediction (ApPredict) under drug-induced block of ion channels. This is a Chaste extension/bolt-on project.

Pharmaceutical R&D Pipeline Intelligence MCP Server — Clinical trials, FDA/EMA approvals, safety data. Questions? Start here!

Safety signal detection in pharmacological data (pharmacovigilance)

A domain-specific language for clinical decision support and biotech workflow automation

Code and Datasets for the paper "A Computational Framework for Identifying Age Risks in Drug-Adverse Event Pairs", published on AMIA 2022 Informatics Summit.

Drug Side Effect Checker - The Pharmacovigilance Dashboard Prototype build with FDA (FAERS) data

Query FDA data on drugs, food, devices, and recalls via openFDA. STDIO or Streamable HTTP.

A real-time application that scrapes public health databases, employs NLP for content analysis, and alerts users about drug safety updates tailored to their preferences

AI system for detecting look-alike sound-alike (LASA) drug name errors using machine learning, NLP, and clinical context validation.

AI-powered pharmacogenomic risk prediction system. Analyzes patient VCF files across 6 genes (CYP2D6, CYP2C19, CYP2C9, SLCO1B1, TPMT, DPYD) to predict drug-specific risks with CPIC-aligned recommendations and Gemini AI explanations.

Intelligent Pharmacovigilance Signal Triage Orchestrator fusing openFDA/FAERS disproportionality, ChEMBL mechanisms, and PubMed literature. Features deterministic multi-source confidence gating, strict/lenient dual-metric evaluation, and an interactive zero-API Streamlit dashboard.

Hypergraph neural networks for drug–drug interaction prediction (PyTorch). HGNN + GCN/GAT/GraphSAGE/MLP baselines.

GLP-1临床试验风险预测系统

Open-source pharmacovigilance engine for FDA adverse event signal detection. Provides validated statistical primitives (PRR, ROR, IC), MedDRA mapping, and reproducibility tools for drug safety research.

Automated pharmacovigilance literature validation for ultra‑rare neurological diseases. Enter a drug name and an adverse event. The app searches PubMed with a multi‑tier cascade, extracts the most relevant evidence, and returns a verdict — Present or Absent — backed by a fine‑tuned PubMedBERT model.

Automated pipeline for extracting drug safety information from FDA Structured Product Labels (SPL) using NLP and MedDRA mapping for pharmacovigilance research.

Azure-native healthcare analytics platform ingesting CMS Medicare and openFDA drug safety data via ADF into ADLS Gen2, loading into Snowflake, transforming with dbt into star schema, validating with Great Expectations, orchestrating with Airflow, and delivering insights through Power BI dashboards.

Personalized drug safety checker powered by GPT-4o and OpenFDA