spatialEpisim: Spatial Tracking of Infectious Disease Epidemics using Mathematical Models
-
Updated
Oct 10, 2024 - R
spatialEpisim: Spatial Tracking of Infectious Disease Epidemics using Mathematical Models
Visualization and modelling of 2018-2019 DRC Ebola data
Data portal and API for Center for Viral Systems Biology (CViSB) data
Predictive modeling for Ebola outbreaks to forecast cases, deaths, and fatality ratios using geographical and epidemiological data. This repository includes predictive models, implementation scripts, and a detailed report on methodology, results, and applications in outbreak management.
Example for BEAST v2.5 paper
Simulation of Ebola outbreak with ReactiveML, an extension to OCaml.
Data and code for a systematic review and meta‐analysis of Ebola outbreak case‐fatality ratios in Uganda (2000–2023), examining how diagnostic and response delays affect mortality.
LOVS Stage Two: Bundibugyo 2026 outbreak application. Descriptive, not predictive. Three-zone framing (Mode A retrospective / Mode B shadow / Zone 3 illustrative). One-page WHO-readable brief + reproducible methodology.
Interactive dashboard tracking the 2026 Bundibugyo Ebola outbreak in DRC & Uganda.
An exploratory data analysis of the 2014 Ebola dataset. Carried out as the third project in the Udacity data analysis nanodegree.
Modeled spread of 2014 Ebola outbreak using differential equations and presented research at an academic Mathematics Colloquium
A dashboard to explore the 2014-2016 Ebola virus outbreak
Testing the effects of CFR, infected, dead and health workers on Ebola transmission
White RA, MacDonald E, de Blasio BF, Nygård K, Vold L, Røttingen J. Projected Treatment Capacity Needs in Sierra Leone. PLOS Currents Outbreaks. 2015 Jan 30 . Edition 1. doi: 10.1371/currents.outbreaks.3c3477556808e44cf41d2511b21dc29f.
Ebola Transmissibility in the 2018-19 Kivu Ebola Epidemic
SEIHRF-OD epidemic model coupled with opinion dynamics for the 2026 Ebola outbreak in eastern DRC.
To associate your repository with the ebola-outbreak topic, visit your repo's landing page and select "manage topics."