Hands-on workshop for genome-scale metabolic model reconstruction using gapseq with Google Colab.
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Jul 24, 2026 - HTML
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gapseq
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Species-agnostic pipeline that builds a pangenome-reference metabolic model and rapidly derives consistent, gap-filled strain-specific genome-scale models from bacterial genomes.
bioinformatics systems-biology computational-biology microbiology cobrapy sbml flux-balance-analysis pangenome genome-scale-metabolic-model metabolic-modeling ppanggolin gapseq
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May 26, 2026 - Python
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