Identification of novel drug targets in multidrug-resistant Helicobacter pylori using subtractive genomics, PBIT, and subcellular localization analysis.
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Jun 15, 2025
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helicobacter-pylori
Here are 7 public repositories matching this topic...
AMR gene screening (TEM-1 and PBP) in Helicobacter pylori isolates from Cape Verde.
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Dec 16, 2025 - Shell
This project explores deep learning–based automated systems to assist in the detection of H. pylori from histopathology images.
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Feb 9, 2026 - Python
A computational pipeline for the pangenomic evaluation of Helicobacter pylori Type IV Secretion Systems (cag-PAI) and flagellar macro-architectures utilizing generalized hidden Markov models.
computational-biology proteomics hidden-markov-models structural-bioinformatics pangenomics pathogenicity-island helicobacter-pylori macsyfinder pan-secretome txsscan cag-pai t4ss type-iv-secretion-system bacterial-secretion-systems flagellar-assembly diderm-pathogens
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Apr 12, 2026 - Python
Helicobacter pylori in stomach - Midede Helicobacter pylori
bacteria infection pathology immunohistochemistry gastric stomach gastrointestinal helicobacter-pylori histochemistry giemsa
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Apr 13, 2026 - HTML
Graph-based pangenomic and synteny analysis of Helicobacter pylori (n=41 complete RefSeq genomes) using PPanGGOLiN, with reproducible workflows for annotation (Prokka), ANI quality control (FastANI), core-genome phylogeny (MAFFT + IQ-TREE 2), resistome profiling (AMRFinderPlus), and publication-grade visualizations.
bioinformatics microbial-genomics comparative-genomics synteny phylogenomics pangenomics mafft resistome prokka fastani bacterial-genomics amrfinderplus iqtree2 helicobacter-pylori ppanggolin
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Aug 4, 2026 - Python
Dual RNA-seq analysis of Helicobacter pylori infection in Homo sapiens (host–pathogen transcriptomics).
bioinformatics rna-seq deseq2 microbiology transcriptomics human-genomics host-pathogen-interactions comparative-transcriptomics helicobacter-pylori
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Dec 25, 2025 - R
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