The framework for quantification of neuronal anatomy
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Oct 13, 2026 - Java
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janelia
Here are 15 public repositories matching this topic...
Janelia Workstation
neuroscience scientific-computing neuroimaging volume-rendering connectomics janelia confocal-microscopy
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Sep 15, 2026 - Java
HortaCloud - 3D annotation platform for large microscopy data
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Aug 11, 2026 - JavaScript
JACS Configuration Management
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Oct 9, 2026 - Shell
Real MaleCNS v1.0 (166,700-neuron) current-injection arcade: Buttons drive the actual fly connectome — the glow is the voltage field.
visualization simulation neuroscience pygame arcade drosophila connectomics brain fly connectome neuroanatomy janelia
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Sep 8, 2026 - Python
EM/LM neuron search
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Oct 3, 2026 - JavaScript
Run Python Ray on the Janelia cluster
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Jul 21, 2026 - Shell
Live display of neural spike data for SpikeGLX software
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Mar 1, 2019 - MATLAB
Fruit Fly (Drosophila MaleCNS v1.0) biological connectome playing Microsoft Minesweeper with real-time 3D WebGL neural activity HUD. Built in PyTorch & Three.js.
webgl threejs reinforcement-learning minesweeper pytorch computational-neuroscience drosophila connectomics connectome janelia neuroglancer biological-neural-networks spiking-neural-network neuro-ai neural-simulation bio-ai brain-simulation malecns fruit-fly-brain doomfly
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Sep 17, 2026 - HTML
Nextflow pipeline for processing tethered fly videos using APT
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Jul 8, 2026 - Nextflow
A dead fruit fly's compass and learning centre, switched back on from its complete wiring diagram (the MaleCNS connectome) and simulated live in your browser. Every neuron and synapse is real.
javascript python webgl web-worker neuroscience computational-neuroscience spiking-neural-networks drosophila connectomics interactive-visualization connectome janelia insect-navigation ring-attractor fruit-fly head-direction neural-simulation leaky-integrate-and-fire brain-simulation mushroom-body
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Oct 7, 2026 - Python
Janelia Research Campus Bridging Registrations for Drosophila Brains
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Feb 11, 2026 - R
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