Issues

• explore Maven route

  wikipathways/reactome2gpml-converter#81 · Filter by author egonw opened on Mar 30, 2023

• book references on pathway get converted to an empty reference with pmid=0

  bug
  wikipathways/reactome2gpml-converter#80 · Filter by author egonw opened on Jan 26, 2021

• Rhea IDs iso Reactome IDs

  wikipathways/reactome2gpml-converter#79 · Filter by author DeniseSl22 opened on Nov 16, 2020

• Complex visualisation bottom cut-off at certain length

  wikipathways/reactome2gpml-converter#78 · Filter by author DeniseSl22 opened on Nov 2, 2020

• Buggy visualisation of complexes, including small datanodes at top left corner

  bug
  wikipathways/reactome2gpml-converter#77 · Filter by author DeniseSl22 opened on Nov 2, 2020

• Check for special characters in description of PW

  wikipathways/reactome2gpml-converter#76 · Filter by author DeniseSl22 opened on Oct 8, 2020
  3

• binaries should not be in the source code repo

  wikipathways/reactome2gpml-converter#75 · Filter by author egonw opened on Aug 29, 2020
  1

• Create name of complex (in hexagon) above full complex below PW

  CheckNewRelease
  wikipathways/reactome2gpml-converter#73 · Filter by author DeniseSl22 opened on Aug 10, 2020
  1

  

• check if we propagate author and curator info properly

  CheckNewReleasequestion
  wikipathways/reactome2gpml-converter#72 · Filter by author egonw opened on Oct 3, 2019
  

• Update BridgeDb Jars

  wikipathways/reactome2gpml-converter#71 · Filter by author DeniseSl22 opened on Feb 25, 2019
  

• do not create empty PubMed citations

  CheckNewRelease
  wikipathways/reactome2gpml-converter#70 · Filter by author egonw opened on Nov 18, 2018
  

• Include not UTF-8 characters in PW title+description

  bugCheckNewRelease
  wikipathways/reactome2gpml-converter#69 · Filter by author DeniseSl22 opened on Nov 1, 2018
  

• Another weird visualisation

  wikipathways/reactome2gpml-converter#68 · Filter by author DeniseSl22 opened on Nov 1, 2018

• Complex visible on RCbranch, not in GPML?

  CheckNewRelease
  wikipathways/reactome2gpml-converter#67 · Filter by author DeniseSl22 opened on Oct 31, 2018
  

• Sets converted to complexes

  bugenhancement
  wikipathways/reactome2gpml-converter#66 · Filter by author mkutmon opened on Oct 30, 2018
  2

  

• Dovitinib is not annotated with a structure identifier in GPML (but is in original)

  CheckNewReleaseenhancement
  wikipathways/reactome2gpml-converter#65 · Filter by author egonw opened on Oct 28, 2018
  1

  

• Description has a stray </div>

  bugCheckNewRelease
  wikipathways/reactome2gpml-converter#63 · Filter by author egonw opened on Oct 28, 2018

• WP2785, WP3334, WP3574, WP3339, WP2790, WP2766 not present in version 66

  CheckNewRelease
  wikipathways/reactome2gpml-converter#61 · Filter by author DeniseSl22 opened on Oct 25, 2018
  4

  

• Exception: class not found -> renderableChemicalDrug v66

  enhancement
  wikipathways/reactome2gpml-converter#59 · Filter by author DeniseSl22 opened on Oct 25, 2018
  3

  

• Missing child PW for 166520

  CheckNewRelease
  wikipathways/reactome2gpml-converter#57 · Filter by author DeniseSl22 opened on Oct 24, 2018
  

• Nucleotide salvage PW not properly converted v.62 Reactome (8956321)

  CheckNewRelease
  wikipathways/reactome2gpml-converter#56 · Filter by author DeniseSl22 opened on Oct 19, 2018
  

• Created GPML file names

  bug
  wikipathways/reactome2gpml-converter#55 · Filter by author DeniseSl22 opened on Oct 18, 2018
  1

  

• Fix log file

  bug
  wikipathways/reactome2gpml-converter#54 · Filter by author DeniseSl22 opened on Oct 18, 2018
  1

  

• Update with BridgeDb 2.2

  CheckNewRelease
  wikipathways/reactome2gpml-converter#51 · Filter by author egonw opened on Aug 27, 2017
  2

  

• trim spaces in text labels of data nodes

  enhancement
  wikipathways/reactome2gpml-converter#47 · Filter by author egonw opened on Dec 15, 2015
  5